Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter endophyticus |
| Strain | JBR3-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1588031 bp
Thymine Count
1595629 bp
Guanine Count
1118331 bp
Cytosine Count
1124079 bp
Genome Length
5426070 bp
Protein-coding Genes
4366 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 30s ribosomal protein s8 | IZT61_09205 | Q11QC6 | Negative | 2309894 - 2310292 | 14599.0 |
| 30s ribosomal protein s14 | IZT61_09210 | A0M585 | Negative | 2310526 - 2310795 | 10029.4 |
| 50s ribosomal protein l5 | IZT61_09215 | A5FMY8 | Negative | 2310795 - 2311358 | 21165.0 |
| 50s ribosomal protein l24 | IZT61_09220 | A6LEI0 | Negative | 2311358 - 2311699 | 12026.9 |
| 50s ribosomal protein l14 | IZT61_09225 | Q11QC2 | Negative | 2311701 - 2312069 | 13350.3 |
| 30s ribosomal protein s17 | IZT61_09230 | B2RLY3 | Negative | 2312071 - 2312325 | 9769.18 |
| 50s ribosomal protein l29 | IZT61_09235 | Q11QC0 | Negative | 2312339 - 2312551 | 7711.28 |
| 50s ribosomal protein l16 | IZT61_09240 | A6LEI4 | Negative | 2312625 - 2313047 | 15870.8 |
| 30s ribosomal protein s3 | IZT61_09245 | Q11QB8 | Negative | 2313088 - 2313927 | 30029.2 |
| 50s ribosomal protein l22 | IZT61_09250 | A0M593 | Negative | 2313937 - 2314299 | 13722.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

