Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter endophyticus |
| Strain | JBR3-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1588031 bp
Thymine Count
1595629 bp
Guanine Count
1118331 bp
Cytosine Count
1124079 bp
Genome Length
5426070 bp
Protein-coding Genes
4366 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 30s ribosomal protein s13 | IZT61_09155 | Q11QD5 | Negative | 2304543 - 2304920 | 14194.4 |
| 50s ribosomal protein l36 | IZT61_09160 | B2RLW9 | Negative | 2304991 - 2305107 | 4548.8 |
| translation initiation factor if-1 | IZT61_09165 | Q5L8D1 | Negative | 2305109 - 2305327 | 8322.27 |
| type i methionyl aminopeptidase | IZT61_09170 | P50614 | Negative | 2305408 - 2306184 | 28044.7 |
| preprotein translocase subunit secy | IZT61_09175 | P43416 | Negative | 2306307 - 2307647 | 48173.4 |
| 50s ribosomal protein l15 | IZT61_09180 | A6LEH2 | Negative | 2307656 - 2308102 | 15650.9 |
| 50s ribosomal protein l30 | IZT61_09185 | Q11QD0 | Negative | 2308238 - 2308417 | 6600.3 |
| 30s ribosomal protein s5 | IZT61_09190 | Q11QC9 | Negative | 2308422 - 2308940 | 17967.0 |
| 50s ribosomal protein l18 | IZT61_09195 | A5N4R3 | Negative | 2308958 - 2309311 | 12658.3 |
| 50s ribosomal protein l6 | IZT61_09200 | A6LEH6 | Negative | 2309317 - 2309874 | 20123.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

