Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter endophyticus |
| Strain | JBR3-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1588031 bp
Thymine Count
1595629 bp
Guanine Count
1118331 bp
Cytosine Count
1124079 bp
Genome Length
5426070 bp
Protein-coding Genes
4366 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atpase | IZT61_09055 | P94414 | Negative | 2278121 - 2279197 | 41016.6 |
| helix-turn-helix transcriptional regulator | IZT61_09060 | Not Available | Negative | 2279851 - 2280273 | 16588.7 |
| duf1801 domain-containing protein | IZT61_09065 | Not Available | Positive | 2280612 - 2281028 | 15585.4 |
| s9 family peptidase | IZT61_09070 | Q10MJ1 | Positive | 2281178 - 2283595 | 89503.4 |
| j domain-containing protein | IZT61_09075 | A9KE65 | Positive | 2283762 - 2284658 | 33563.4 |
| chaperone modulator cbpm | IZT61_09080 | Not Available | Positive | 2284665 - 2284961 | 11518.9 |
| duf853 family protein | IZT61_09085 | P39342 | Positive | 2285562 - 2287136 | 56634.3 |
| nucleotidyltransferase | IZT61_09090 | Not Available | Positive | 2287205 - 2288104 | 33828.1 |
| aminoglycoside phosphotransferase family protein | IZT61_09095 | E8MF12 | Positive | 2288095 - 2289168 | 41030.1 |
| molecular chaperone dnak | IZT61_09100 | A6LDG8 | Negative | 2289840 - 2291750 | 68368.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

