Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter endophyticus |
| Strain | JBR3-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1588031 bp
Thymine Count
1595629 bp
Guanine Count
1118331 bp
Cytosine Count
1124079 bp
Genome Length
5426070 bp
Protein-coding Genes
4366 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | IZT61_08955 | Not Available | Positive | 2264284 - 2264514 | 8571.34 |
| pin domain-containing protein | IZT61_08960 | Not Available | Positive | 2264511 - 2264846 | 12270.7 |
| signal recognition particle-docking protein ftsy | IZT61_08965 | P51835 | Positive | 2264921 - 2265883 | 34846.1 |
| dmt family transporter | IZT61_08970 | Not Available | Positive | 2265944 - 2266320 | 13599.8 |
| 30s ribosomal protein s12 methylthiotransferase rimo | IZT61_08975 | A5FA30 | Positive | 2266403 - 2267737 | 50366.4 |
| duf4160 domain-containing protein | IZT61_08980 | Not Available | Positive | 2267756 - 2268025 | 10529.0 |
| duf2442 domain-containing protein | IZT61_08985 | Not Available | Positive | 2268030 - 2268254 | 8570.25 |
| hypothetical protein | IZT61_08990 | Not Available | Positive | 2268387 - 2268896 | 18840.9 |
| hypothetical protein | IZT61_08995 | Not Available | Negative | 2268946 - 2269284 | 11966.7 |
| hypothetical protein | IZT61_09000 | Not Available | Negative | 2269358 - 2269963 | 22258.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

