Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter endophyticus |
| Strain | JBR3-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1588031 bp
Thymine Count
1595629 bp
Guanine Count
1118331 bp
Cytosine Count
1124079 bp
Genome Length
5426070 bp
Protein-coding Genes
4366 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cation:proton antiporter | IZT61_08755 | P39830 | Positive | 2200190 - 2202403 | 81654.2 |
| duf2157 domain-containing protein | IZT61_08760 | Not Available | Positive | 2202584 - 2203618 | 39778.6 |
| yjbq family protein | IZT61_08765 | P0A2L2 | Positive | 2203926 - 2204348 | 16004.0 |
| yihy/virulence factor brkb family protein | IZT61_08770 | A1REM8 | Negative | 2204485 - 2205462 | 35603.8 |
| alpha/beta fold hydrolase | IZT61_08775 | Q9WYH1 | Negative | 2205614 - 2206933 | 48091.0 |
| doxx family protein | IZT61_08780 | Not Available | Negative | 2207014 - 2207391 | 14063.9 |
| voc family protein | IZT61_08785 | P16681 | Negative | 2207523 - 2207933 | 14968.0 |
| transcriptional regulator | IZT61_08790 | Not Available | Negative | 2207939 - 2208343 | 15261.2 |
| helix-turn-helix domain-containing protein | IZT61_08795 | A0A0H2ZIC3 | Positive | 2208462 - 2209448 | 36987.8 |
| hypothetical protein | IZT61_08800 | Not Available | Negative | 2210491 - 2210874 | 14093.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

