Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter endophyticus |
| Strain | JBR3-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1588031 bp
Thymine Count
1595629 bp
Guanine Count
1118331 bp
Cytosine Count
1124079 bp
Genome Length
5426070 bp
Protein-coding Genes
4366 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | IZT61_08705 | Not Available | Negative | 2193737 - 2194165 | 16040.2 |
| cell division protein ftsx | IZT61_08710 | A5FMG4 | Positive | 2194362 - 2195240 | 32787.7 |
| duf3098 domain-containing protein | IZT61_08715 | Not Available | Positive | 2195240 - 2195470 | 8483.76 |
| duf2281 domain-containing protein | IZT61_08720 | Not Available | Positive | 2195507 - 2195713 | 7877.41 |
| type ii toxin-antitoxin system vapc family toxin | IZT61_08725 | Not Available | Positive | 2195713 - 2196099 | 14828.1 |
| undecaprenyl-diphosphate phosphatase | IZT61_08730 | A6H239 | Positive | 2196119 - 2196913 | 29231.8 |
| trna pseudouridine(55) synthase trub | IZT61_08735 | Q9RB36 | Positive | 2196940 - 2197671 | 27455.9 |
| yitt family protein | IZT61_08740 | P54478 | Positive | 2197668 - 2198528 | 31082.9 |
| bifunctional riboflavin kinase/fad synthetase | IZT61_08745 | P44957 | Positive | 2198682 - 2199695 | 37888.7 |
| hypothetical protein | IZT61_08750 | Not Available | Positive | 2199754 - 2200107 | 13862.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

