Vibrio neonatus HDD 3-1, HDD3-1

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Vibrio

Description

Vibrio neonatus HDD 3-1, designated as HDD3-1, is characterized by possessing two replicons. This trait is significant because the presence of multiple replicons can influence the organism's genomic structure and replication dynamics, potentially affecting its adaptability and survival in various environments. The genomic information for Vibrio neonatus HDD 3-1 is cataloged under the accessions AP024885.1 and AP024886.1. These accessions provide a reference for researchers interested in studying the specific genetic makeup and functional capacities of this strain. Vibrio species, including V. neonatus, are often associated with aquatic environments, which suggests that HDD 3-1 may occupy similar ecological niches. The dual-replicon structure could confer advantages such as enhanced genetic diversity and the ability to adapt to changing environmental conditions. This adaptability is crucial for survival in fluctuating habitats, particularly in marine ecosystems where Vibrio species are commonly found. In conclusion, the traits of Vibrio neonatus HDD 3-1, particularly its two replicons and the associated genomic accessions, highlight its potential for adaptability in aquatic environments, underscoring the importance of genomic studies in understanding the ecological roles of microbial organisms.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusVibrio
SpeciesVibrio neonatus
StrainHDD 3-1, HDD3-1

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Vibrio neonatus HDD 3-1, HDD3-1
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Vibrio neonatus HDD 3-1, HDD3-1, Complete Genome

Gene Summary

Adenine Count

313129 bp

Thymine Count

311882 bp

Guanine Count

234343 bp

Cytosine Count

235181 bp

Genome Length

1094535 bp

Protein-coding Genes

842 genes

Non-Coding Genes

1 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
Trna nucleotidyltransferase-A5F5I2Positive2386691 - 238792346851.0
hypothetical protein-Not AvailableNegative2387989 - 238879229111.4
hypothetical protein-Not AvailableNegative2388792 - 238929818885.6
hypothetical protein-Not AvailableNegative2389295 - 238965413345.0
AttlNot AvailableNot AvailablePositive2389782 - 2389793Not Available
hypothetical protein-Not AvailablePositive2389827 - 239042021135.7
Glycation-binding protein, predicted protease/chaperone-B7VIH2Negative2390545 - 239156136266.8
30s ribosomal protein s21-A7MWP7Positive2391783 - 23919988324.26
Gp509-P54464Positive2392024 - 239246716084.6
Dna primase-Q8FDG5Positive2392508 - 239432268331.0

Displaying genes 1 – 10 of 3379 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.