Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter riviphilus |
| Strain | SW-16 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter riviphilus SW-16
Accession NumberCP061171.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4781 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| crp/fnr family transcriptional regulator | H9N25_00105 | Not Available | - | 21829 - 22464 | 24305.3 |
| potassium-transporting atpase subunit f | H9N25_00110 | Not Available | + | 23020 - 23100 | 3092.19 |
| potassium-transporting atpase subunit kdpa | H9N25_00115 | A5FIF9 | + | 23139 - 24857 | 62363.0 |
| potassium-transporting atpase subunit kdpb | H9N25_00120 | Q9RZP0 | + | 24949 - 26976 | 71853.7 |
| k(+)-transporting atpase subunit c | H9N25_00125 | A5FIF7 | + | 27079 - 27642 | 20007.7 |
| porin | H9N25_00130 | Not Available | + | 27948 - 29018 | 39156.0 |
| hypothetical protein | H9N25_00135 | Not Available | + | 29187 - 29435 | 9465.29 |
| sensor protein kdpd | H9N25_00140 | P73870 | + | 29441 - 30571 | 42782.3 |
| sdr family oxidoreductase | H9N25_00145 | O32229 | + | 30711 - 31505 | 28557.4 |
| hypothetical protein | H9N25_00150 | Not Available | + | 31689 - 32762 | 37817.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.