Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter riviphilus |
| Strain | SW-16 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1802189 bp
Thymine Count
1779389 bp
Guanine Count
1131489 bp
Cytosine Count
1112294 bp
Genome Length
5825361 bp
Protein-coding Genes
4781 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | H9N25_04755 | Not Available | Positive | 1143126 - 1143341 | 8424.18 |
| pspc family transcriptional regulator | H9N25_04760 | Not Available | Positive | 1143472 - 1143690 | 8613.88 |
| ankyrin repeat domain-containing protein | H9N25_04765 | Q04749 | Negative | 1143780 - 1144436 | 23608.3 |
| dna translocase ftsk | H9N25_04770 | Q8KBK0 | Positive | 1146269 - 1148863 | 96367.9 |
| doxx family membrane protein | H9N25_04775 | Not Available | Positive | 1148925 - 1149574 | 23952.6 |
| right-handed parallel beta-helix repeat-containing protein | H9N25_04780 | E3E7F9 | Positive | 1149849 - 1150718 | 29921.0 |
| hypothetical protein | H9N25_04785 | Not Available | Positive | 1151499 - 1151771 | 10349.6 |
| mbl fold metallo-hydrolase | H9N25_04790 | Q7MUY1 | Positive | 1151821 - 1152585 | 28821.6 |
| hypothetical protein | H9N25_04795 | Not Available | Negative | 1152620 - 1153258 | 23866.4 |
| Trna-leu | Not Available | Not Available | Positive | 1153551 - 1153634 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

