Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter riviphilus |
| Strain | SW-16 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1802189 bp
Thymine Count
1779389 bp
Guanine Count
1131489 bp
Cytosine Count
1112294 bp
Genome Length
5825361 bp
Protein-coding Genes
4781 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | H9N25_04605 | Not Available | Negative | 1116645 - 1116953 | 10978.1 |
| hypothetical protein | H9N25_04610 | Not Available | Negative | 1117052 - 1117471 | 15995.8 |
| duf4173 domain-containing protein | H9N25_04615 | Not Available | Negative | 1117486 - 1118289 | 30813.9 |
| hypothetical protein | H9N25_04620 | Not Available | Negative | 1118397 - 1119047 | 24401.7 |
| hypothetical protein | H9N25_04625 | Not Available | Negative | 1119059 - 1119367 | 11767.1 |
| transcriptional regulator | H9N25_04630 | Q57874 | Negative | 1119416 - 1119712 | 11028.6 |
| hypothetical protein | H9N25_04635 | Not Available | Negative | 1119715 - 1120350 | 23711.4 |
| abc transporter atp-binding protein | H9N25_04640 | Q8A1M1 | Positive | 1120554 - 1121204 | 23690.6 |
| hypothetical protein | H9N25_04645 | Not Available | Positive | 1121313 - 1121792 | 17486.1 |
| had hydrolase-like protein | H9N25_04650 | Not Available | Positive | 1121794 - 1122402 | 23899.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

