Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter riviphilus |
| Strain | SW-16 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter riviphilus SW-16
Accession NumberCP061171.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4781 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma-70 factor | H9N25_00405 | Q06198 | + | 85207 - 85785 | 22708.6 |
| fecr domain-containing protein | H9N25_00410 | Not Available | + | 85901 - 87049 | 42890.6 |
| susc/raga family tonb-linked outer membrane protein | H9N25_00415 | T2KMI3 | + | 87249 - 90839 | 130877.0 |
| ragb/susd family nutrient uptake outer membrane protein | H9N25_00420 | Not Available | + | 90855 - 92315 | 54815.0 |
| tlpa family protein disulfide reductase | H9N25_00425 | Q5KXL9 | + | 92375 - 93622 | 47364.7 |
| sugar transporter | H9N25_00430 | Not Available | + | 93630 - 94079 | 16990.0 |
| ahpc/tsa family protein | H9N25_00435 | Q73B22 | + | 94104 - 95249 | 41952.2 |
| response regulator transcription factor | H9N25_00440 | Q82Z76 | - | 95512 - 96189 | 26188.0 |
| histidine kinase | H9N25_00445 | P94513 | - | 96186 - 97241 | 41298.8 |
| erythromycin esterase family protein | H9N25_00450 | P05789 | + | 97423 - 98709 | 48782.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.