Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter riviphilus |
| Strain | SW-16 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1802189 bp
Thymine Count
1779389 bp
Guanine Count
1131489 bp
Cytosine Count
1112294 bp
Genome Length
5825361 bp
Protein-coding Genes
4781 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sialate o-acetylesterase | H9N25_04055 | P70665 | Positive | 961802 - 963742 | 72664.5 |
| glycoside hydrolase family 2 protein | H9N25_04060 | A7LXS9 | Positive | 963852 - 966278 | 90977.6 |
| glycoside hydrolase family 97 protein | H9N25_04065 | Q8A6L0 | Positive | 966358 - 968343 | 75011.0 |
| glycoside hydrolase family 43 protein | H9N25_04070 | A7LXT8 | Positive | 968525 - 970093 | 58940.5 |
| doxx family membrane protein | H9N25_04075 | D5EV35 | Positive | 970205 - 971074 | 31213.6 |
| esterase family protein | H9N25_04080 | P10478 | Positive | 971108 - 971989 | 32792.0 |
| doxx family membrane protein | H9N25_04085 | Q8GEA9 | Positive | 972049 - 974135 | 79219.9 |
| hypothetical protein | H9N25_04090 | T2KMF4 | Positive | 974272 - 974784 | 19904.7 |
| doxx family membrane protein | H9N25_04095 | Not Available | Positive | 974781 - 975146 | 13544.8 |
| response regulator | H9N25_04100 | T2KMF4 | Positive | 975249 - 978443 | 121376.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

