Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter riviphilus |
| Strain | SW-16 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1802189 bp
Thymine Count
1779389 bp
Guanine Count
1131489 bp
Cytosine Count
1112294 bp
Genome Length
5825361 bp
Protein-coding Genes
4781 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | H9N25_03505 | Not Available | Positive | 845161 - 845643 | 17208.7 |
| hypothetical protein | H9N25_03510 | Not Available | Positive | 845869 - 846384 | 17416.9 |
| hypothetical protein | H9N25_03515 | Not Available | Positive | 846604 - 848199 | 59355.9 |
| port family protein | H9N25_03520 | Not Available | Positive | 848380 - 849036 | 23361.7 |
| gliding motility-associated abc transporter permease subunit gldf | H9N25_03525 | Not Available | Positive | 849212 - 849937 | 26927.4 |
| gliding motility-associated abc transporter substrate-binding protein gldg | H9N25_03530 | O51693 | Positive | 849937 - 851622 | 63096.5 |
| dna polymerase iii subunit beta | H9N25_03535 | P52023 | Positive | 851656 - 852780 | 41275.3 |
| duf4397 domain-containing protein | H9N25_03540 | Not Available | Positive | 852863 - 853543 | 24491.0 |
| duf4397 domain-containing protein | H9N25_03545 | Not Available | Positive | 853603 - 854319 | 25733.8 |
| deda family protein | H9N25_03550 | P0ABP7 | Positive | 854384 - 855070 | 25672.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

