Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter riviphilus |
| Strain | SW-16 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1802189 bp
Thymine Count
1779389 bp
Guanine Count
1131489 bp
Cytosine Count
1112294 bp
Genome Length
5825361 bp
Protein-coding Genes
4781 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | H9N25_03005 | Not Available | Positive | 744733 - 745023 | 10781.1 |
| cell division protein zapa | H9N25_03010 | Q0I2U9 | Positive | 745057 - 745347 | 11135.4 |
| ribonuclease y | H9N25_03015 | Q89ZG0 | Positive | 745648 - 747219 | 58775.3 |
| duf962 domain-containing protein | H9N25_03020 | O13737 | Positive | 747307 - 747822 | 19578.5 |
| outer membrane beta-barrel protein | H9N25_03025 | T2KM18 | Positive | 747936 - 750719 | 102173.0 |
| hypothetical protein | H9N25_03030 | Not Available | Positive | 750823 - 752205 | 48156.4 |
| hypothetical protein | H9N25_03035 | Not Available | Positive | 752526 - 753704 | 42373.9 |
| hypothetical protein | H9N25_03040 | Not Available | Negative | 753842 - 754147 | 11404.0 |
| hypothetical protein | H9N25_03045 | Not Available | Positive | 754297 - 754449 | 5841.24 |
| hypothetical protein | H9N25_03050 | Not Available | Negative | 754446 - 754721 | 10138.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

