Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter riviphilus |
| Strain | SW-16 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter riviphilus SW-16
Accession NumberCP061171.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4781 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| histidine kinase | H9N25_00255 | P0AD15 | + | 49965 - 51707 | 67076.7 |
| response regulator transcription factor | H9N25_00260 | P94514 | + | 51704 - 52462 | 28880.0 |
| hypothetical protein | H9N25_00265 | Not Available | + | 52475 - 53995 | 56695.9 |
| doxx family membrane protein | H9N25_00270 | Not Available | - | 54105 - 54371 | 9770.84 |
| fkbm family methyltransferase | H9N25_00275 | D4GYG5 | + | 54551 - 55360 | 29887.2 |
| undecaprenyl-phosphate glucose phosphotransferase | H9N25_00280 | Q48460 | - | 55357 - 56760 | 54303.9 |
| glycosyltransferase family 4 protein | H9N25_00285 | P32057 | - | 56807 - 58003 | 45458.2 |
| fkbm family methyltransferase | H9N25_00290 | J4KLK4 | - | 58000 - 58740 | 27448.2 |
| glycosyltransferase family 4 protein | H9N25_00295 | P26402 | - | 58737 - 59837 | 41832.9 |
| fkbm family methyltransferase | H9N25_00300 | Not Available | - | 59850 - 60719 | 33353.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.