Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter riviphilus |
| Strain | SW-16 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1802189 bp
Thymine Count
1779389 bp
Guanine Count
1131489 bp
Cytosine Count
1112294 bp
Genome Length
5825361 bp
Protein-coding Genes
4781 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| single-stranded dna-binding protein | H9N25_02655 | Q8KB47 | Positive | 665766 - 666113 | 12786.1 |
| tonb-dependent receptor | H9N25_02660 | P76115 | Negative | 666169 - 668220 | 76772.8 |
| hypothetical protein | H9N25_02665 | Not Available | Negative | 668854 - 669480 | 24601.7 |
| dinb family protein | H9N25_02670 | Q02886 | Negative | 669922 - 670416 | 19090.6 |
| hypothetical protein | H9N25_02675 | Not Available | Negative | 670698 - 671300 | 23252.9 |
| hypothetical protein | H9N25_02680 | Not Available | Negative | 671535 - 672107 | 21974.6 |
| ankyrin repeat domain-containing protein | H9N25_02685 | Q8Q0U0 | Negative | 672303 - 673655 | 49445.8 |
| ankyrin repeat domain-containing protein | H9N25_02690 | Q04861 | Negative | 673659 - 674861 | 45572.6 |
| nadp-dependent isocitrate dehydrogenase | H9N25_02695 | P16100 | Positive | 675450 - 677669 | 79741.0 |
| hypothetical protein | H9N25_02700 | Not Available | Positive | 678220 - 678624 | 15115.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

