Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter riviphilus |
| Strain | SW-16 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter riviphilus SW-16
Accession NumberCP061171.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4781 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| duf3667 domain-containing protein | H9N25_00205 | Not Available | + | 41339 - 42070 | 27735.8 |
| fad-dependent monooxygenase | H9N25_00210 | M1WCF5 | - | 42311 - 43855 | 56212.1 |
| arac family transcriptional regulator | H9N25_00215 | Not Available | - | 43932 - 44747 | 30315.4 |
| hamp domain-containing histidine kinase | H9N25_00220 | P23545 | - | 44823 - 46160 | 51257.2 |
| response regulator transcription factor | H9N25_00225 | Q70FH0 | - | 46162 - 46836 | 26133.6 |
| hypothetical protein | H9N25_00230 | Not Available | - | 46842 - 47693 | 31782.2 |
| hypothetical protein | H9N25_00235 | Not Available | - | 47698 - 47982 | 10669.5 |
| duf4382 domain-containing protein | H9N25_00240 | Not Available | + | 48177 - 48974 | 27664.5 |
| hypothetical protein | H9N25_00245 | Not Available | + | 49006 - 49503 | 18603.4 |
| hypothetical protein | H9N25_00250 | Not Available | - | 49555 - 49725 | 5880.25 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.