Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter riviphilus |
| Strain | SW-16 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1802189 bp
Thymine Count
1779389 bp
Guanine Count
1131489 bp
Cytosine Count
1112294 bp
Genome Length
5825361 bp
Protein-coding Genes
4781 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| merc domain-containing protein | H9N25_02405 | Not Available | Positive | 617232 - 617624 | 14251.2 |
| hypothetical protein | H9N25_02410 | Not Available | Positive | 617637 - 617795 | 6087.75 |
| atp-binding cassette domain-containing protein | H9N25_02415 | O34392 | Positive | 617788 - 618414 | 22948.8 |
| ftsx-like permease family protein | H9N25_02420 | Not Available | Positive | 618414 - 619628 | 44333.7 |
| hypothetical protein | H9N25_02425 | Not Available | Positive | 619646 - 619870 | 8199.34 |
| hypothetical protein | H9N25_02430 | Not Available | Positive | 619891 - 620082 | 6901.63 |
| hypothetical protein | H9N25_02435 | Not Available | Positive | 620079 - 620516 | 16192.0 |
| hypothetical protein | H9N25_02440 | Not Available | Positive | 620513 - 620965 | 17096.0 |
| transcriptional repressor | H9N25_02445 | Q2FY19 | Positive | 620986 - 621423 | 16177.4 |
| acyl transferase | H9N25_02450 | Not Available | Negative | 621424 - 622422 | 37472.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

