Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter riviphilus |
| Strain | SW-16 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter riviphilus SW-16
Accession NumberCP061171.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4781 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| brxa/brxb family bacilliredoxin | H9N25_24050 | Q11WG7 | + | 5792636 - 5793046 | 14890.0 |
| tigr00159 family protein | H9N25_24055 | A0A0H3GM48 | - | 5793203 - 5793994 | 29830.1 |
| four helix bundle protein | H9N25_24060 | Not Available | - | 5794120 - 5794482 | 13948.8 |
| dihydropteroate synthase | H9N25_24065 | P0AC14 | - | 5794620 - 5795471 | 30971.7 |
| duf1599 domain-containing protein | H9N25_24070 | Not Available | + | 5795571 - 5796116 | 20882.2 |
| doxx family protein | H9N25_24075 | Q45FN5 | + | 5796154 - 5797305 | 43316.4 |
| abc transporter permease | H9N25_24080 | P94311 | + | 5797308 - 5798363 | 38987.5 |
| damage-inducible protein dinb | H9N25_24085 | Q02886 | + | 5798367 - 5798813 | 17404.7 |
| shikimate kinase | H9N25_24090 | Q8A2B2 | + | 5798834 - 5799337 | 19115.0 |
| phytoene desaturase | H9N25_24095 | L7WC64 | - | 5799368 - 5800846 | 55983.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.