Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter riviphilus |
| Strain | SW-16 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1802189 bp
Thymine Count
1779389 bp
Guanine Count
1131489 bp
Cytosine Count
1112294 bp
Genome Length
5825361 bp
Protein-coding Genes
4781 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | H9N25_22805 | Not Available | Positive | 5499375 - 5500316 | 37189.8 |
| serine hydrolase | H9N25_22810 | Q2FVH6 | Positive | 5500426 - 5501994 | 57681.2 |
| sgnh/gdsl hydrolase family protein | H9N25_22815 | Q09LX1 | Positive | 5502012 - 5502671 | 24419.6 |
| dna primase | H9N25_22820 | Q9KD44 | Positive | 5502799 - 5504778 | 74525.1 |
| yran family protein | H9N25_22825 | A6GVQ6 | Positive | 5504856 - 5505221 | 13977.4 |
| glutaminyl-peptide cyclotransferase | H9N25_22830 | Q84WV9 | Positive | 5505199 - 5506281 | 39926.7 |
| duf4251 domain-containing protein | H9N25_22835 | Not Available | Negative | 5506370 - 5506900 | 19604.4 |
| prealbumin-like fold domain-containing protein | H9N25_22840 | Not Available | Negative | 5506998 - 5507630 | 22588.1 |
| tfox/sxy family protein | H9N25_22845 | Not Available | Negative | 5507721 - 5508062 | 12864.8 |
| ribonuclease hii | H9N25_22850 | Q5LIL2 | Positive | 5508755 - 5509363 | 22792.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

