Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter riviphilus |
| Strain | SW-16 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1802189 bp
Thymine Count
1779389 bp
Guanine Count
1131489 bp
Cytosine Count
1112294 bp
Genome Length
5825361 bp
Protein-coding Genes
4781 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad(p)h-dependent oxidoreductase | H9N25_22655 | P45245 | Positive | 5468350 - 5468928 | 22074.0 |
| lysophospholipid acyltransferase family protein | H9N25_22660 | P0ACV1 | Positive | 5469086 - 5470012 | 36334.1 |
| lysophospholipid acyltransferase family protein | H9N25_22665 | P0ACV1 | Positive | 5470102 - 5471016 | 35505.4 |
| serine hydrolase | H9N25_22670 | P07061 | Positive | 5471047 - 5472237 | 45075.2 |
| hypothetical protein | H9N25_22675 | Not Available | Positive | 5472355 - 5473398 | 40916.3 |
| type 1 glutamine amidotransferase | H9N25_22680 | O06006 | Negative | 5473499 - 5474059 | 20265.8 |
| hypothetical protein | H9N25_22685 | Not Available | Negative | 5474134 - 5474823 | 27245.6 |
| glycosyltransferase | H9N25_22690 | P0A5A0 | Negative | 5474827 - 5475573 | 28828.4 |
| glycosyltransferase | H9N25_22695 | Q59002 | Negative | 5475700 - 5476980 | 48165.0 |
| pd40 domain-containing protein | H9N25_22700 | Q972G5 | Positive | 5477055 - 5480249 | 120602.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

