Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter riviphilus |
| Strain | SW-16 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1802189 bp
Thymine Count
1779389 bp
Guanine Count
1131489 bp
Cytosine Count
1112294 bp
Genome Length
5825361 bp
Protein-coding Genes
4781 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nadh-quinone oxidoreductase subunit a | H9N25_22455 | A6H1R4 | Positive | 5428359 - 5428730 | 14051.7 |
| nadh-quinone oxidoreductase subunit b | H9N25_22460 | A6H1R3 | Positive | 5428938 - 5429480 | 19677.9 |
| nadh-quinone oxidoreductase subunit c | H9N25_22465 | A5G9B7 | Positive | 5429480 - 5429980 | 19342.3 |
| nadh-quinone oxidoreductase subunit d | H9N25_22470 | Q11VB5 | Positive | 5429984 - 5431198 | 46292.4 |
| nad(p)h-dependent oxidoreductase subunit e | H9N25_22475 | Q9D6J6 | Positive | 5431191 - 5431706 | 19195.2 |
| nadh-quinone oxidoreductase subunit nuof | H9N25_22480 | P56913 | Positive | 5431783 - 5433150 | 49637.7 |
| (2fe-2s)-binding protein | H9N25_22485 | O21241 | Positive | 5433294 - 5434304 | 37877.4 |
| nadh-quinone oxidoreductase subunit nuoh | H9N25_22490 | Q11VB9 | Positive | 5434304 - 5435359 | 38988.2 |
| nadh-quinone oxidoreductase subunit i | H9N25_22495 | Q11VC0 | Positive | 5435362 - 5435865 | 19171.5 |
| nadh-quinone oxidoreductase subunit j | H9N25_22500 | Q9ZCG3 | Positive | 5435996 - 5436499 | 18196.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

