Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter riviphilus |
| Strain | SW-16 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1802189 bp
Thymine Count
1779389 bp
Guanine Count
1131489 bp
Cytosine Count
1112294 bp
Genome Length
5825361 bp
Protein-coding Genes
4781 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4350 domain-containing protein | H9N25_21505 | Not Available | Negative | 5218821 - 5220011 | 45397.7 |
| duf4129 domain-containing protein | H9N25_21510 | Not Available | Negative | 5220008 - 5220736 | 28664.8 |
| hypothetical protein | H9N25_21515 | Not Available | Negative | 5220738 - 5221622 | 33879.4 |
| stage ii sporulation protein m | H9N25_21520 | Not Available | Negative | 5221624 - 5222577 | 36073.4 |
| rdd family protein | H9N25_21525 | Not Available | Positive | 5222778 - 5223521 | 27645.0 |
| duf2752 domain-containing protein | H9N25_21530 | Not Available | Negative | 5223518 - 5223844 | 12439.8 |
| hypothetical protein | H9N25_21535 | Not Available | Negative | 5223851 - 5224339 | 17561.6 |
| sgnh/gdsl hydrolase family protein | H9N25_21540 | Not Available | Negative | 5224426 - 5225151 | 26053.0 |
| lipoyl(octanoyl) transferase lipb | H9N25_21545 | A0M5H7 | Negative | 5225197 - 5225931 | 27610.9 |
| 4'-phosphopantetheinyl transferase superfamily protein | H9N25_21550 | P40683 | Negative | 5225937 - 5226584 | 24827.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

