Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter riviphilus |
| Strain | SW-16 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1802189 bp
Thymine Count
1779389 bp
Guanine Count
1131489 bp
Cytosine Count
1112294 bp
Genome Length
5825361 bp
Protein-coding Genes
4781 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyltransferase | H9N25_02105 | Not Available | Negative | 539820 - 540938 | 43676.6 |
| hypothetical protein | H9N25_02110 | Not Available | Negative | 540938 - 541771 | 33242.2 |
| glycosyl transferase | H9N25_02115 | O06484 | Negative | 541771 - 542757 | 38815.7 |
| glycosyltransferase family 2 protein | H9N25_02120 | P11290 | Negative | 542763 - 543569 | 31593.8 |
| class i sam-dependent methyltransferase | H9N25_02125 | A8EY40 | Negative | 543570 - 544280 | 27109.8 |
| catb-related o-acetyltransferase | H9N25_02130 | P50868 | Negative | 544328 - 544837 | 19229.1 |
| atp-binding cassette domain-containing protein | H9N25_02135 | Q50863 | Negative | 544955 - 546202 | 46805.4 |
| abc transporter permease | H9N25_02140 | Q48478 | Negative | 546253 - 547107 | 32529.7 |
| glycosyltransferase family 4 protein | H9N25_02145 | A0R043 | Negative | 547134 - 548243 | 40994.3 |
| asparagine synthase (glutamine-hydrolyzing) | H9N25_02150 | P54420 | Negative | 548254 - 550053 | 68073.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

