Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter riviphilus |
| Strain | SW-16 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1802189 bp
Thymine Count
1779389 bp
Guanine Count
1131489 bp
Cytosine Count
1112294 bp
Genome Length
5825361 bp
Protein-coding Genes
4781 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | H9N25_21405 | Not Available | Negative | 5199690 - 5200034 | 13477.6 |
| gfo/idh/moca family oxidoreductase | H9N25_21410 | O42896 | Positive | 5200139 - 5201176 | 38439.9 |
| zinc-dependent peptidase | H9N25_21415 | P73079 | Positive | 5201185 - 5201958 | 29450.4 |
| hypothetical protein | H9N25_21420 | Not Available | Positive | 5201976 - 5202866 | 32553.5 |
| alpha/beta hydrolase | H9N25_21425 | P17548 | Negative | 5202991 - 5203977 | 37004.0 |
| duf2807 domain-containing protein | H9N25_21430 | Not Available | Negative | 5204105 - 5204947 | 31016.1 |
| gntr family transcriptional regulator | H9N25_21435 | P54590 | Negative | 5204952 - 5205326 | 14778.8 |
| hypothetical protein | H9N25_21440 | Not Available | Negative | 5205342 - 5206145 | 31033.3 |
| abc transporter atp-binding protein | H9N25_21445 | O34641 | Negative | 5206149 - 5206976 | 31033.9 |
| doxx family protein | H9N25_21450 | Not Available | Positive | 5207189 - 5207584 | 14512.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

