Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter riviphilus |
| Strain | SW-16 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1802189 bp
Thymine Count
1779389 bp
Guanine Count
1131489 bp
Cytosine Count
1112294 bp
Genome Length
5825361 bp
Protein-coding Genes
4781 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| n-acetyltransferase family protein | H9N25_21055 | P71043 | Negative | 5121528 - 5122013 | 18196.8 |
| Trna-asp | Not Available | Not Available | Positive | 5123686 - 5123759 | Not Available |
| dinb family protein | H9N25_21065 | Not Available | Negative | 5123834 - 5124382 | 21132.4 |
| gnat family n-acetyltransferase | H9N25_21070 | P40677 | Negative | 5124426 - 5124860 | 16736.2 |
| dihydrolipoyl dehydrogenase | H9N25_21075 | P31023 | Negative | 5124886 - 5126289 | 50999.6 |
| tetr/acrr family transcriptional regulator | H9N25_21080 | Q9RMY4 | Negative | 5126350 - 5126946 | 22534.3 |
| hypothetical protein | H9N25_21085 | Not Available | Negative | 5127057 - 5127581 | 20040.8 |
| glycoside hydrolase family 11 protein | H9N25_21090 | P18429 | Negative | 5127705 - 5128472 | 27867.0 |
| hypothetical protein | H9N25_21095 | Not Available | Positive | 5128778 - 5129191 | 14669.7 |
| hypothetical protein | H9N25_21100 | Not Available | Negative | 5129328 - 5130470 | 43677.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

