Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter riviphilus |
| Strain | SW-16 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1802189 bp
Thymine Count
1779389 bp
Guanine Count
1131489 bp
Cytosine Count
1112294 bp
Genome Length
5825361 bp
Protein-coding Genes
4781 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyltransferase family 4 protein | H9N25_02055 | Q58577 | Negative | 530445 - 531605 | 44880.2 |
| hypothetical protein | H9N25_02060 | Not Available | Negative | 531598 - 532830 | 47617.4 |
| hypothetical protein | H9N25_02065 | Not Available | Negative | 532895 - 533623 | 28161.8 |
| hypothetical protein | H9N25_02070 | Not Available | Negative | 533620 - 534861 | 47461.9 |
| glycosyltransferase family 4 protein | H9N25_02075 | P39862 | Negative | 534902 - 535690 | 29856.2 |
| hypothetical protein | H9N25_02080 | Not Available | Negative | 535693 - 536064 | 14126.5 |
| glycosyltransferase family 4 protein | H9N25_02085 | P46915 | Negative | 536057 - 537094 | 39262.0 |
| glycosyltransferase family 2 protein | H9N25_02090 | Q68X33 | Negative | 537102 - 538043 | 35405.2 |
| hypothetical protein | H9N25_02095 | Not Available | Negative | 538043 - 538861 | 32161.2 |
| glycosyl transferase | H9N25_02100 | Not Available | Negative | 538843 - 539670 | 32207.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

