Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter riviphilus |
| Strain | SW-16 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter riviphilus SW-16
Accession NumberCP061171.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4781 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma-70 factor | H9N25_00155 | O05404 | + | 32907 - 33491 | 23090.7 |
| fecr domain-containing protein | H9N25_00160 | Not Available | + | 33502 - 34461 | 36144.5 |
| hypothetical protein | H9N25_00165 | Not Available | + | 34461 - 36197 | 63179.6 |
| ydei/ompd-associated family protein | H9N25_00170 | Not Available | + | 36659 - 37264 | 23129.3 |
| yafy family transcriptional regulator | H9N25_00175 | O34920 | + | 37315 - 38277 | 37781.0 |
| damage-inducible protein dinb | H9N25_00180 | O34334 | - | 38294 - 38764 | 18478.2 |
| winged helix-turn-helix transcriptional regulator | H9N25_00185 | O27346 | - | 38942 - 39334 | 14913.4 |
| sdr family oxidoreductase | H9N25_00190 | P39333 | + | 39427 - 40167 | 25556.8 |
| helix-turn-helix transcriptional regulator | H9N25_00195 | Q8CN75 | - | 40242 - 41000 | 29282.4 |
| hypothetical protein | H9N25_00200 | Not Available | + | 41088 - 41333 | 9109.63 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.