Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter riviphilus |
| Strain | SW-16 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1802189 bp
Thymine Count
1779389 bp
Guanine Count
1131489 bp
Cytosine Count
1112294 bp
Genome Length
5825361 bp
Protein-coding Genes
4781 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type 1 glutamine amidotransferase domain-containing protein | H9N25_19905 | Q5AF03 | Positive | 4850248 - 4850928 | 24617.3 |
| hypothetical protein | H9N25_19910 | Not Available | Negative | 4850983 - 4851237 | 9825.2 |
| mbl fold metallo-hydrolase | H9N25_19915 | Q5SLP1 | Positive | 4851387 - 4852769 | 51704.4 |
| glutamate-5-semialdehyde dehydrogenase | H9N25_19920 | B4SG68 | Negative | 4852916 - 4854163 | 45019.6 |
| glutamate 5-kinase | H9N25_19925 | Q8A1E7 | Negative | 4854296 - 4855375 | 38913.4 |
| s9 family peptidase | H9N25_19930 | O07834 | Positive | 4855730 - 4857880 | 81509.1 |
| hypothetical protein | H9N25_19935 | Not Available | Positive | 4858007 - 4858459 | 16914.1 |
| insulinase family protein | H9N25_19940 | O32965 | Positive | 4858486 - 4859718 | 46329.3 |
| peptide deformylase | H9N25_19945 | A0M3P3 | Positive | 4859810 - 4860370 | 21121.5 |
| hypothetical protein | H9N25_19950 | Not Available | Positive | 4860375 - 4860887 | 19676.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

