Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter riviphilus |
| Strain | SW-16 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1802189 bp
Thymine Count
1779389 bp
Guanine Count
1131489 bp
Cytosine Count
1112294 bp
Genome Length
5825361 bp
Protein-coding Genes
4781 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | H9N25_19550 | Not Available | Positive | 4751444 - 4752469 | 39167.8 |
| hypothetical protein | H9N25_19555 | Not Available | Positive | 4752476 - 4753435 | 36257.9 |
| hypothetical protein | H9N25_19560 | Not Available | Positive | 4753435 - 4754997 | 60489.7 |
| hypothetical protein | H9N25_19565 | Not Available | Positive | 4755001 - 4755318 | 11930.4 |
| hypothetical protein | H9N25_19570 | Not Available | Positive | 4755339 - 4755548 | 7899.65 |
| thermonuclease family protein | H9N25_19575 | Q57519 | Positive | 4755530 - 4756057 | 20084.8 |
| duf2807 domain-containing protein | H9N25_19580 | Not Available | Negative | 4756368 - 4756979 | 21605.9 |
| response regulator transcription factor | H9N25_19585 | Q81JL3 | Negative | 4757243 - 4757989 | 28657.9 |
| histidine kinase | H9N25_19590 | Q5HLG3 | Negative | 4757999 - 4759915 | 73273.1 |
| tigr04139 family peptide modification target | H9N25_19595 | Not Available | Positive | 4760340 - 4760582 | 8677.22 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

