Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter riviphilus |
| Strain | SW-16 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1802189 bp
Thymine Count
1779389 bp
Guanine Count
1131489 bp
Cytosine Count
1112294 bp
Genome Length
5825361 bp
Protein-coding Genes
4781 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | H9N25_19000 | Not Available | Negative | 4620971 - 4621195 | 8402.54 |
| hypothetical protein | H9N25_19005 | Not Available | Negative | 4621244 - 4621705 | 17540.0 |
| superoxide dismutase | H9N25_19010 | P28760 | Negative | 4621804 - 4622415 | 22595.7 |
| nucleoside deaminase | H9N25_19015 | Q99W51 | Negative | 4622626 - 4623093 | 17352.9 |
| pp_03749 | H9N25_19020 | Not Available | Negative | 4623308 - 4623643 | Not Available |
| carbohydrate kinase | H9N25_19025 | Q8CR47 | Positive | 4623838 - 4625322 | 54084.4 |
| doxx family membrane protein | H9N25_19030 | Q4UNZ4 | Positive | 4625396 - 4626726 | 48320.8 |
| sodium/sugar symporter | H9N25_19035 | P96169 | Positive | 4626978 - 4628645 | 60763.7 |
| hypothetical protein | H9N25_19040 | Not Available | Negative | 4629093 - 4629473 | 13958.7 |
| abc transporter permease | H9N25_19045 | P44250 | Negative | 4629475 - 4630710 | 45536.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

