Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter riviphilus |
| Strain | SW-16 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1802189 bp
Thymine Count
1779389 bp
Guanine Count
1131489 bp
Cytosine Count
1112294 bp
Genome Length
5825361 bp
Protein-coding Genes
4781 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| metallophosphoesterase | H9N25_01855 | Q8YLG0 | Positive | 482086 - 483054 | 37110.1 |
| metallophosphoesterase | H9N25_01860 | Q8YLG0 | Positive | 483073 - 484011 | 35549.4 |
| alpha-l-fucosidase | H9N25_01865 | P10901 | Positive | 483989 - 485476 | 57393.9 |
| duf2490 domain-containing protein | H9N25_01870 | Not Available | Positive | 485639 - 486391 | 28935.8 |
| laci family dna-binding transcriptional regulator | H9N25_01875 | P0ACN9 | Positive | 486471 - 487493 | 37766.9 |
| hypothetical protein | H9N25_01880 | Not Available | Negative | 487963 - 489402 | 54574.0 |
| hypothetical protein | H9N25_01885 | Not Available | Positive | 489632 - 490117 | 18550.6 |
| hypothetical protein | H9N25_01890 | Not Available | Positive | 490071 - 490493 | 16055.7 |
| atp-binding protein | H9N25_01895 | Not Available | Negative | 490502 - 491818 | 50202.6 |
| Trna-ser | Not Available | Not Available | Positive | 492110 - 492193 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

