Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter riviphilus |
| Strain | SW-16 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1802189 bp
Thymine Count
1779389 bp
Guanine Count
1131489 bp
Cytosine Count
1112294 bp
Genome Length
5825361 bp
Protein-coding Genes
4781 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | H9N25_18800 | Not Available | Positive | 4579934 - 4580548 | 21290.6 |
| flippase | H9N25_18805 | Q58770 | Positive | 4580627 - 4581946 | 48856.2 |
| fkbm family methyltransferase | H9N25_18810 | Not Available | Positive | 4581943 - 4582590 | 24003.7 |
| class i sam-dependent methyltransferase | H9N25_18815 | Q7UG04 | Positive | 4582604 - 4583365 | 29192.3 |
| sugar transferase | H9N25_18820 | Not Available | Positive | 4583529 - 4584446 | 34981.1 |
| pa2169 family four-helix-bundle protein | H9N25_18825 | Not Available | Positive | 4584551 - 4585006 | 16972.9 |
| cyanophycin synthetase | H9N25_18830 | P56947 | Negative | 4585173 - 4587788 | 96468.3 |
| cyanophycinase | H9N25_18835 | P0C8P2 | Positive | 4588084 - 4588959 | 31458.0 |
| isoaspartyl peptidase/l-asparaginase | H9N25_18840 | P74383 | Positive | 4589055 - 4589897 | 29815.0 |
| hypothetical protein | H9N25_18845 | Not Available | Positive | 4589927 - 4590616 | 25799.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

