Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter riviphilus |
| Strain | SW-16 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1802189 bp
Thymine Count
1779389 bp
Guanine Count
1131489 bp
Cytosine Count
1112294 bp
Genome Length
5825361 bp
Protein-coding Genes
4781 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyltransferase family 2 protein | H9N25_18550 | P26403 | Negative | 4524544 - 4525467 | 34584.0 |
| glycosyltransferase family 2 protein | H9N25_18555 | Not Available | Negative | 4525493 - 4526404 | 34356.1 |
| flippase | H9N25_18560 | P37746 | Negative | 4526409 - 4527860 | 54285.7 |
| hypothetical protein | H9N25_18565 | Not Available | Negative | 4527911 - 4528828 | 35453.9 |
| epsg family protein | H9N25_18570 | P71056 | Negative | 4528828 - 4530048 | 47533.2 |
| glycosyltransferase | H9N25_18575 | Not Available | Negative | 4530143 - 4531342 | 45837.6 |
| acyltransferase | H9N25_18580 | P40892 | Negative | 4531343 - 4531903 | 21024.2 |
| gdp-l-fucose synthase | H9N25_18585 | O49213 | Negative | 4531935 - 4532882 | 35567.6 |
| gdp-mannose 4,6-dehydratase | H9N25_18590 | P0AC90 | Negative | 4532882 - 4534009 | 42278.3 |
| polysaccharide biosynthesis tyrosine autokinase | H9N25_18595 | O52788 | Negative | 4534026 - 4536380 | 87516.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

