Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter riviphilus |
| Strain | SW-16 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1802189 bp
Thymine Count
1779389 bp
Guanine Count
1131489 bp
Cytosine Count
1112294 bp
Genome Length
5825361 bp
Protein-coding Genes
4781 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter | H9N25_17745 | Q5EXK5 | Positive | 4329385 - 4330566 | 42894.3 |
| sulfurtransferase | H9N25_17750 | Q9I452 | Positive | 4330626 - 4331471 | 30785.6 |
| duf177 domain-containing protein | H9N25_17755 | Not Available | Positive | 4331716 - 4332246 | 20523.4 |
| 50s ribosomal protein l32 | H9N25_17760 | A6H261 | Positive | 4332262 - 4332453 | 7104.6 |
| phosphate acyltransferase plsx | H9N25_17765 | Q11UM2 | Positive | 4332555 - 4333493 | 33429.0 |
| ketoacyl-acp synthase iii | H9N25_17770 | A6LEP7 | Positive | 4333512 - 4334510 | 36064.9 |
| acetyl-coa carboxylase biotin carboxyl carrier protein | H9N25_17775 | P49786 | Positive | 4334683 - 4335159 | 17065.7 |
| doxx family membrane protein | H9N25_17780 | P37798 | Positive | 4335296 - 4336635 | 49625.1 |
| twin-arginine translocase subunit tatc | H9N25_17785 | D0J948 | Positive | 4336706 - 4337587 | 33010.2 |
| ribose 5-phosphate isomerase b | H9N25_17790 | P37351 | Positive | 4337633 - 4338070 | 16142.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

