Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter riviphilus |
| Strain | SW-16 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1802189 bp
Thymine Count
1779389 bp
Guanine Count
1131489 bp
Cytosine Count
1112294 bp
Genome Length
5825361 bp
Protein-coding Genes
4781 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4595 domain-containing protein | H9N25_17395 | Not Available | Negative | 4253502 - 4254302 | 28750.0 |
| alpha/beta hydrolase | H9N25_17400 | P26223 | Negative | 4254344 - 4255258 | 33350.4 |
| peptide chain release factor 2 | H9N25_17405 | Q02ZM8 | Negative | 4255269 - 4256288 | 38649.4 |
| amidohydrolase | H9N25_17410 | O07598 | Negative | 4256498 - 4257802 | 46748.9 |
| hypothetical protein | H9N25_17415 | Not Available | Negative | 4258045 - 4258551 | 17398.3 |
| glucose-6-phosphate isomerase | H9N25_17420 | B7NFW8 | Positive | 4258708 - 4260354 | 61457.8 |
| insulinase family protein | H9N25_17425 | P55679 | Positive | 4260615 - 4261928 | 49639.4 |
| insulinase family protein | H9N25_17430 | P55680 | Positive | 4261962 - 4263374 | 50561.4 |
| helix-turn-helix transcriptional regulator | H9N25_17435 | Not Available | Negative | 4263429 - 4263821 | 15528.7 |
| hypothetical protein | H9N25_17440 | Not Available | Positive | 4263971 - 4264153 | 6648.17 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

