Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter riviphilus |
| Strain | SW-16 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1802189 bp
Thymine Count
1779389 bp
Guanine Count
1131489 bp
Cytosine Count
1112294 bp
Genome Length
5825361 bp
Protein-coding Genes
4781 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4189 domain-containing protein | H9N25_16795 | Not Available | Positive | 4096768 - 4097847 | 39159.1 |
| dihydrofolate reductase | H9N25_16800 | P37508 | Negative | 4098229 - 4098804 | 21175.2 |
| hypothetical protein | H9N25_16805 | Not Available | Positive | 4099149 - 4099754 | 23021.6 |
| hypothetical protein | H9N25_16810 | Not Available | Positive | 4099802 - 4100458 | 25100.0 |
| hypothetical protein | H9N25_16815 | Not Available | Positive | 4100473 - 4100859 | 14884.6 |
| hypothetical protein | H9N25_16820 | Not Available | Positive | 4100861 - 4101610 | 28864.9 |
| doxx family membrane protein | H9N25_16825 | Not Available | Positive | 4101677 - 4104390 | 101834.0 |
| hypothetical protein | H9N25_16830 | Not Available | Positive | 4104381 - 4104797 | 16234.3 |
| hypothetical protein | H9N25_16835 | Not Available | Positive | 4104790 - 4105089 | 11354.3 |
| hypothetical protein | H9N25_16840 | Not Available | Negative | 4105453 - 4105815 | 13443.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

