Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter riviphilus |
| Strain | SW-16 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1802189 bp
Thymine Count
1779389 bp
Guanine Count
1131489 bp
Cytosine Count
1112294 bp
Genome Length
5825361 bp
Protein-coding Genes
4781 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ytxh domain-containing protein | H9N25_16495 | Not Available | Positive | 4018067 - 4018261 | 7527.07 |
| hypothetical protein | H9N25_16500 | Not Available | Negative | 4018533 - 4018808 | 10447.6 |
| hypothetical protein | H9N25_16505 | Not Available | Negative | 4018934 - 4019179 | 8892.07 |
| 30s ribosomal protein s10 | H9N25_16510 | A0M599 | Negative | 4019280 - 4019585 | 11418.2 |
| elongation factor g | H9N25_16515 | Q11QB0 | Negative | 4019723 - 4021837 | 77822.2 |
| 30s ribosomal protein s7 | H9N25_16520 | Q11QA9 | Negative | 4021967 - 4022434 | 17578.6 |
| 30s ribosomal protein s12 | H9N25_16525 | Q11QA8 | Negative | 4022452 - 4022865 | 15095.5 |
| prohibitin family protein | H9N25_16530 | Q9P7H3 | Positive | 4023415 - 4024320 | 33057.2 |
| rhodanese-like domain-containing protein | H9N25_16535 | Not Available | Positive | 4024337 - 4024924 | 22088.2 |
| hypothetical protein | H9N25_16540 | Not Available | Negative | 4024921 - 4025379 | 16400.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

