Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter riviphilus |
| Strain | SW-16 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1802189 bp
Thymine Count
1779389 bp
Guanine Count
1131489 bp
Cytosine Count
1112294 bp
Genome Length
5825361 bp
Protein-coding Genes
4781 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome-c peroxidase | H9N25_01605 | P0DV69 | Negative | 420779 - 422572 | 67196.2 |
| hypothetical protein | H9N25_01610 | Not Available | Negative | 422647 - 424134 | 53943.7 |
| hypothetical protein | H9N25_01615 | Not Available | Positive | 424320 - 425825 | 55707.8 |
| hypothetical protein | H9N25_01620 | Not Available | Negative | 425896 - 426783 | 33957.4 |
| hypothetical protein | H9N25_01625 | Not Available | Negative | 426783 - 427769 | 38617.4 |
| hypothetical protein | H9N25_01630 | Not Available | Negative | 427834 - 428328 | 19159.3 |
| hypothetical protein | H9N25_01635 | Not Available | Negative | 428420 - 428887 | 17771.9 |
| hypothetical protein | H9N25_01640 | Not Available | Negative | 429058 - 429441 | 14827.6 |
| hypothetical protein | H9N25_01645 | Not Available | Negative | 429489 - 429959 | 18239.7 |
| duf4870 domain-containing protein | H9N25_01650 | Not Available | Negative | 430026 - 430355 | 11960.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

