Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter riviphilus |
| Strain | SW-16 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1802189 bp
Thymine Count
1779389 bp
Guanine Count
1131489 bp
Cytosine Count
1112294 bp
Genome Length
5825361 bp
Protein-coding Genes
4781 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 30s ribosomal protein s14 | H9N25_16395 | A0M585 | Negative | 4005930 - 4006199 | 10057.5 |
| 50s ribosomal protein l5 | H9N25_16400 | A5FMY8 | Negative | 4006199 - 4006762 | 21151.0 |
| 50s ribosomal protein l24 | H9N25_16405 | A6LEI0 | Negative | 4006762 - 4007103 | 11958.8 |
| 50s ribosomal protein l14 | H9N25_16410 | Q11QC2 | Negative | 4007105 - 4007473 | 13350.3 |
| 30s ribosomal protein s17 | H9N25_16415 | B2RLY3 | Negative | 4007475 - 4007729 | 9799.21 |
| 50s ribosomal protein l29 | H9N25_16420 | Q11QC0 | Negative | 4007743 - 4007955 | 7768.38 |
| 50s ribosomal protein l16 | H9N25_16425 | A6LEI4 | Negative | 4008029 - 4008451 | 15870.8 |
| 30s ribosomal protein s3 | H9N25_16430 | Q11QB8 | Negative | 4008492 - 4009337 | 30111.3 |
| 50s ribosomal protein l22 | H9N25_16435 | A0M593 | Negative | 4009345 - 4009704 | 13608.7 |
| 30s ribosomal protein s19 | H9N25_16440 | Q5L8B3 | Negative | 4009712 - 4009978 | 10059.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

