Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter riviphilus |
| Strain | SW-16 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1802189 bp
Thymine Count
1779389 bp
Guanine Count
1131489 bp
Cytosine Count
1112294 bp
Genome Length
5825361 bp
Protein-coding Genes
4781 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1801 domain-containing protein | H9N25_16245 | Not Available | Positive | 3977303 - 3977719 | 15451.5 |
| prolyl oligopeptidase family serine peptidase | H9N25_16250 | Q10MJ1 | Positive | 3978027 - 3980444 | 89425.6 |
| j domain-containing protein | H9N25_16255 | A9KE65 | Positive | 3980818 - 3981714 | 33660.6 |
| chaperone modulator cbpm | H9N25_16260 | Not Available | Positive | 3981720 - 3982025 | 11841.2 |
| duf853 family protein | H9N25_16265 | P39342 | Positive | 3982120 - 3983694 | 56898.7 |
| hypothetical protein | H9N25_16270 | Not Available | Positive | 3983707 - 3984369 | 25302.6 |
| nucleotidyltransferase | H9N25_16275 | Not Available | Positive | 3984493 - 3985392 | 34048.4 |
| aminoglycoside phosphotransferase family protein | H9N25_16280 | E8MF12 | Positive | 3985383 - 3986459 | 41458.6 |
| hypothetical protein | H9N25_16285 | Not Available | Positive | 3986507 - 3986803 | 11424.1 |
| molecular chaperone dnak | H9N25_16290 | A6LDG8 | Negative | 3987134 - 3989038 | 68098.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

