Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter riviphilus |
| Strain | SW-16 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1802189 bp
Thymine Count
1779389 bp
Guanine Count
1131489 bp
Cytosine Count
1112294 bp
Genome Length
5825361 bp
Protein-coding Genes
4781 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | H9N25_16145 | Not Available | Negative | 3958453 - 3959139 | 26611.4 |
| l-glutamate gamma-semialdehyde dehydrogenase | H9N25_16150 | Q54RA2 | Positive | 3959359 - 3960993 | 60301.9 |
| arylsulfatase | H9N25_16155 | Q8A2H2 | Positive | 3961063 - 3962571 | 55671.3 |
| hypothetical protein | H9N25_16160 | Not Available | Positive | 3962681 - 3962941 | 9302.37 |
| carbonate dehydratase | H9N25_16165 | P61517 | Negative | 3963001 - 3963657 | 24115.8 |
| sulp family inorganic anion transporter | H9N25_16170 | O06984 | Negative | 3963660 - 3965267 | 57418.6 |
| hypothetical protein | H9N25_16175 | Not Available | Negative | 3965423 - 3965767 | 13242.2 |
| acyl-coa carboxylase subunit beta | H9N25_16180 | Q3J4E3 | Positive | 3966133 - 3967674 | 56120.1 |
| mfs transporter | H9N25_16185 | Q8X4V6 | Positive | 3967807 - 3968937 | 41179.6 |
| gnat family n-acetyltransferase | H9N25_16190 | O06744 | Positive | 3968992 - 3969411 | 16367.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

