Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter riviphilus |
| Strain | SW-16 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1802189 bp
Thymine Count
1779389 bp
Guanine Count
1131489 bp
Cytosine Count
1112294 bp
Genome Length
5825361 bp
Protein-coding Genes
4781 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidase domain-containing abc transporter | H9N25_16095 | P59852 | Negative | 3949025 - 3951226 | 81766.4 |
| hlyd family efflux transporter periplasmic adaptor subunit | H9N25_16100 | P55125 | Negative | 3951298 - 3952458 | 43659.4 |
| class iib bacteriocin, lactobin a/cerein 7b family | H9N25_16105 | Not Available | Negative | 3952625 - 3952789 | 5771.94 |
| hypothetical protein | H9N25_16110 | Not Available | Negative | 3952796 - 3952963 | 6285.73 |
| hypothetical protein | H9N25_16115 | Not Available | Negative | 3953622 - 3953993 | 13790.8 |
| hypothetical protein | H9N25_16120 | Not Available | Negative | 3954083 - 3954298 | 7829.98 |
| hypothetical protein | H9N25_16125 | Not Available | Positive | 3954775 - 3954954 | 6511.9 |
| hypothetical protein | H9N25_16130 | Not Available | Positive | 3955035 - 3956456 | 53990.6 |
| histidine kinase | H9N25_16135 | P0AD15 | Positive | 3956666 - 3957589 | 35255.9 |
| response regulator transcription factor | H9N25_16140 | Q8FFE0 | Positive | 3957586 - 3958311 | 27369.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

