Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter riviphilus |
| Strain | SW-16 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1802189 bp
Thymine Count
1779389 bp
Guanine Count
1131489 bp
Cytosine Count
1112294 bp
Genome Length
5825361 bp
Protein-coding Genes
4781 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | H9N25_01555 | Not Available | Negative | 408718 - 409395 | 25622.6 |
| blai/meci/copy family transcriptional regulator | H9N25_01560 | O54281 | Positive | 409739 - 410128 | 15060.2 |
| m48 family metalloprotease | H9N25_01565 | P12287 | Positive | 410158 - 412062 | 70945.5 |
| tonb-dependent receptor | H9N25_01570 | Not Available | Positive | 412092 - 414539 | 91766.1 |
| hypothetical protein | H9N25_01575 | Not Available | Negative | 414536 - 414838 | 11440.0 |
| gluconate permease | H9N25_01580 | P39835 | Negative | 415052 - 416341 | 45093.5 |
| hypothetical protein | H9N25_01585 | Not Available | Negative | 416363 - 416545 | 6794.12 |
| abc transporter permease | H9N25_01590 | P77504 | Negative | 416663 - 419197 | 93550.8 |
| abc transporter atp-binding protein | H9N25_01595 | P0A9T9 | Negative | 419190 - 419879 | 24626.5 |
| arylesterase | H9N25_01600 | Q9HZY8 | Positive | 419984 - 420667 | 24818.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

