Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter riviphilus |
| Strain | SW-16 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1802189 bp
Thymine Count
1779389 bp
Guanine Count
1131489 bp
Cytosine Count
1112294 bp
Genome Length
5825361 bp
Protein-coding Genes
4781 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| adenylate kinase | H9N25_15295 | A6GZB9 | Negative | 3753646 - 3754221 | 21214.4 |
| hypothetical protein | H9N25_15300 | Not Available | Negative | 3754857 - 3755465 | 22414.0 |
| hypothetical protein | H9N25_15305 | Not Available | Positive | 3755709 - 3755888 | 6824.06 |
| hypothetical protein | H9N25_15310 | Not Available | Negative | 3756017 - 3756781 | 26756.6 |
| Trna-arg | Not Available | Not Available | Positive | 3757221 - 3757297 | Not Available |
| redoxin domain-containing protein | H9N25_15320 | P9WIE0 | Negative | 3757397 - 3757861 | 17079.2 |
| doxx family membrane protein | H9N25_15325 | D4GU71 | Negative | 3757945 - 3758846 | 33487.4 |
| f0f1 atp synthase subunit beta | H9N25_15330 | A0M791 | Positive | 3759008 - 3760510 | 54176.0 |
| atp synthase f1 subunit epsilon | H9N25_15335 | B8EQQ2 | Positive | 3760597 - 3760842 | 8728.66 |
| alpha/beta hydrolase | H9N25_15340 | Q97UA2 | Negative | 3760910 - 3761860 | 35702.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

