Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter riviphilus |
| Strain | SW-16 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1802189 bp
Thymine Count
1779389 bp
Guanine Count
1131489 bp
Cytosine Count
1112294 bp
Genome Length
5825361 bp
Protein-coding Genes
4781 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | H9N25_13445 | A1T9S1 | Positive | 3308589 - 3309878 | 49560.7 |
| hypothetical protein | H9N25_13450 | Not Available | Positive | 3309875 - 3311143 | 48435.9 |
| hypothetical protein | H9N25_13455 | Not Available | Positive | 3311136 - 3311645 | 19266.8 |
| hypothetical protein | H9N25_13460 | Not Available | Negative | 3311722 - 3313800 | 77462.8 |
| alpha/beta hydrolase | H9N25_13465 | O07015 | Positive | 3313957 - 3314793 | 31097.2 |
| insulinase family protein | H9N25_13470 | Not Available | Positive | 3315412 - 3316032 | 22756.9 |
| m28 family metallopeptidase | H9N25_13475 | E5A6Z0 | Positive | 3316186 - 3317535 | 50202.7 |
| tryptophan-rich sensory protein | H9N25_13480 | O28797 | Positive | 3317582 - 3318055 | 18100.8 |
| patatin-like phospholipase family protein | H9N25_13485 | O34731 | Positive | 3318111 - 3320402 | 86740.5 |
| hypothetical protein | H9N25_13490 | Not Available | Positive | 3320399 - 3320929 | 19783.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

