Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter riviphilus |
| Strain | SW-16 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1802189 bp
Thymine Count
1779389 bp
Guanine Count
1131489 bp
Cytosine Count
1112294 bp
Genome Length
5825361 bp
Protein-coding Genes
4781 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| doxx family membrane protein | H9N25_12150 | Q72J02 | Positive | 2956206 - 2957311 | 40589.8 |
| molybdenum cofactor biosynthesis protein moae | H9N25_12155 | Q9Z223 | Positive | 2957313 - 2957756 | 16639.0 |
| bifunctional molybdenum cofactor biosynthesis protein moac/moab | H9N25_12160 | P59014 | Positive | 2957758 - 2958666 | 33075.3 |
| hypothetical protein | H9N25_12165 | Not Available | Positive | 2958782 - 2959123 | 13336.7 |
| hypothetical protein | H9N25_12170 | Not Available | Negative | 2959125 - 2959796 | 24912.3 |
| cold shock domain-containing protein | H9N25_12175 | P0A358 | Negative | 2960042 - 2960230 | 6936.21 |
| hypothetical protein | H9N25_12180 | Not Available | Negative | 2960393 - 2960683 | 11245.6 |
| smp-30/gluconolactonase/lre family protein | H9N25_12185 | Q01578 | Negative | 2961184 - 2962074 | 33329.6 |
| abc transporter atp-binding protein | H9N25_12190 | Q9WYC4 | Negative | 2962114 - 2963877 | 65177.4 |
| abc transporter atp-binding protein | H9N25_12195 | O31707 | Negative | 2963861 - 2965597 | 63716.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

