Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter riviphilus |
| Strain | SW-16 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1802189 bp
Thymine Count
1779389 bp
Guanine Count
1131489 bp
Cytosine Count
1112294 bp
Genome Length
5825361 bp
Protein-coding Genes
4781 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lamg domain-containing protein | H9N25_10800 | Not Available | Negative | 2631763 - 2632674 | 32622.5 |
| ricin domain-containing protein | H9N25_10805 | P36905 | Negative | 2632620 - 2637503 | 174916.0 |
| helix-turn-helix domain-containing protein | H9N25_10810 | Not Available | Negative | 2639037 - 2639288 | 9429.35 |
| helix-turn-helix transcriptional regulator | H9N25_10815 | P42406 | Negative | 2639413 - 2639802 | 14853.2 |
| phzf family phenazine biosynthesis protein | H9N25_10820 | P58293 | Positive | 2640008 - 2640892 | 32035.1 |
| hypothetical protein | H9N25_10825 | Not Available | Negative | 2641270 - 2641731 | 17009.8 |
| hypothetical protein | H9N25_10830 | Not Available | Negative | 2642261 - 2642947 | 26275.8 |
| immunity 22 family protein | H9N25_10835 | Not Available | Negative | 2643063 - 2643818 | 28422.8 |
| hypothetical protein | H9N25_10840 | Not Available | Negative | 2643830 - 2644078 | 9185.74 |
| hypothetical protein | H9N25_10845 | Not Available | Negative | 2644161 - 2644670 | 19883.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

