Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter riviphilus |
| Strain | SW-16 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1802189 bp
Thymine Count
1779389 bp
Guanine Count
1131489 bp
Cytosine Count
1112294 bp
Genome Length
5825361 bp
Protein-coding Genes
4781 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1349 domain-containing protein | H9N25_10600 | P40893 | Positive | 2577456 - 2578100 | 24870.8 |
| lrp/asnc family transcriptional regulator | H9N25_10605 | Not Available | Positive | 2578200 - 2578319 | 4677.73 |
| hypothetical protein | H9N25_10610 | Not Available | Negative | 2578824 - 2579261 | 16328.6 |
| efflux rnd transporter permease subunit | H9N25_10615 | P94177 | Negative | 2579430 - 2582558 | 114971.0 |
| efflux rnd transporter periplasmic adaptor subunit | H9N25_10620 | P13510 | Negative | 2582585 - 2583691 | 40856.6 |
| tolc family protein | H9N25_10625 | P13509 | Negative | 2583701 - 2584987 | 48877.2 |
| hypothetical protein | H9N25_10630 | Not Available | Positive | 2585282 - 2585755 | 16825.6 |
| hypothetical protein | H9N25_10635 | Not Available | Positive | 2585784 - 2586005 | 7839.76 |
| hypothetical protein | H9N25_10640 | Not Available | Positive | 2586287 - 2586754 | 16769.5 |
| hypothetical protein | H9N25_10645 | Not Available | Positive | 2586788 - 2587003 | 7662.53 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

