Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter riviphilus |
| Strain | SW-16 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1802189 bp
Thymine Count
1779389 bp
Guanine Count
1131489 bp
Cytosine Count
1112294 bp
Genome Length
5825361 bp
Protein-coding Genes
4781 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | H9N25_10550 | Not Available | Positive | 2567540 - 2568301 | 29179.2 |
| hypothetical protein | H9N25_10555 | Not Available | Positive | 2568407 - 2568904 | 18773.8 |
| doxx family membrane protein | H9N25_10560 | Not Available | Negative | 2569238 - 2571281 | 75370.8 |
| molybdopterin-guanine dinucleotide biosynthesis protein mobb | H9N25_10565 | Not Available | Negative | 2571291 - 2572214 | 35066.7 |
| hypothetical protein | H9N25_10570 | Not Available | Negative | 2572217 - 2572759 | 20942.8 |
| hypothetical protein | H9N25_10575 | Not Available | Negative | 2572992 - 2573336 | 12932.6 |
| hypothetical protein | H9N25_10580 | Not Available | Negative | 2573890 - 2574297 | 15142.7 |
| jab domain-containing protein | H9N25_10585 | A5FMW5 | Negative | 2574869 - 2575324 | 16658.2 |
| hypothetical protein | H9N25_10590 | Not Available | Positive | 2575343 - 2575486 | 5692.04 |
| helix-turn-helix transcriptional regulator | H9N25_10595 | P07026 | Negative | 2576587 - 2577354 | 29103.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

